Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SALL1Q9NSC2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 ACTG1P3-201ENST00000431775 1114 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 AC007274.1-201ENST00000439805 662 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 ENPP7P5-201ENST00000541031 1031 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 MIR5189-201ENST00000577370 114 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 AL049840.4-201ENST00000602422 811 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 AL512343.1-201ENST00000605837 169 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 CU634019.7-201ENST00000624153 1185 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 FP236241.2-201ENST00000624906 1185 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 CICP6-201ENST00000457191 2729 ntBASIC19.02■□□□□ 0.64
SALL1Q9NSC2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SALL1Q9NSC2 AC008741.2-201ENST00000612792 3115 ntBASIC19.02■□□□□ 0.63
SALL1Q9NSC2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SALL1Q9NSC2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.02■□□□□ 0.63
SALL1Q9NSC2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SALL1Q9NSC2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.02■□□□□ 0.63
SALL1Q9NSC2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 AC134915.1-201ENST00000426461 574 ntBASIC19.01■□□□□ 0.63
SALL1Q9NSC2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 AC120045.2-201ENST00000567334 178 ntBASIC19.01■□□□□ 0.63
SALL1Q9NSC2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SALL1Q9NSC2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19■□□□□ 0.63
SALL1Q9NSC2 MIR1909-201ENST00000411312 80 ntBASIC19■□□□□ 0.63
SALL1Q9NSC2 AC022210.1-201ENST00000449856 793 ntBASIC19■□□□□ 0.63
SALL1Q9NSC2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19■□□□□ 0.63
SALL1Q9NSC2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 MIR6805-201ENST00000615055 62 ntBASIC19■□□□□ 0.63
SALL1Q9NSC2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19■□□□□ 0.63
SALL1Q9NSC2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SALL1Q9NSC2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19■□□□□ 0.63
SALL1Q9NSC2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19■□□□□ 0.63
SALL1Q9NSC2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19■□□□□ 0.63
SALL1Q9NSC2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SALL1Q9NSC2 AL133267.1-201ENST00000398220 340 ntBASIC19■□□□□ 0.63
SALL1Q9NSC2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms