Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL691432.1-201ENST00000596308 1422 ntBASIC16.48■□□□□ 0.23
HPS4Q9NQG7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS4Q9NQG7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 AZGP1P1-201ENST00000411909 902 ntBASIC16.47■□□□□ 0.23
HPS4Q9NQG7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 AC022210.1-201ENST00000449856 793 ntBASIC16.47■□□□□ 0.23
HPS4Q9NQG7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 AL391069.4-201ENST00000609583 481 ntBASIC16.47■□□□□ 0.23
HPS4Q9NQG7 MIR6805-201ENST00000615055 62 ntBASIC16.47■□□□□ 0.23
HPS4Q9NQG7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 CLK3P2-201ENST00000427566 1453 ntBASIC16.47■□□□□ 0.23
HPS4Q9NQG7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
HPS4Q9NQG7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 MIR658-201ENST00000385210 100 ntBASIC16.46■□□□□ 0.23
HPS4Q9NQG7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 EEF1DP4-201ENST00000446006 880 ntBASIC16.46■□□□□ 0.23
HPS4Q9NQG7 POU5F1P6-201ENST00000466990 990 ntBASIC16.46■□□□□ 0.23
HPS4Q9NQG7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 AL512343.1-201ENST00000605837 169 ntBASIC16.46■□□□□ 0.23
HPS4Q9NQG7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HPS4Q9NQG7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
HPS4Q9NQG7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS4Q9NQG7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS4Q9NQG7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.46■□□□□ 0.22
HPS4Q9NQG7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS4Q9NQG7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS4Q9NQG7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS4Q9NQG7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms