Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 REXO1L1P-202ENST00000608646 1974 ntBASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRTM1Q9HBL6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 FAM220BP-201ENST00000377689 816 ntBASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 AC004987.2-201ENST00000395959 1148 ntBASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 AC023274.1-201ENST00000418278 595 ntBASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 AC092902.6-201ENST00000641783 218 ntBASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LRTM1Q9HBL6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 AC138035.3-201ENST00000622706 2791 ntBASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 RPS8P6-201ENST00000426177 609 ntBASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.34■□□□□ 0.05
LRTM1Q9HBL6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
LRTM1Q9HBL6 AC023824.1-201ENST00000562945 2975 ntBASIC15.33■□□□□ 0.05
LRTM1Q9HBL6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms