Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 TUBB3P1-201ENST00000405796 1332 ntBASIC16.41■□□□□ 0.22
USP29Q9HBJ7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
USP29Q9HBJ7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 KLF2P3-201ENST00000451977 1087 ntBASIC16.4■□□□□ 0.22
USP29Q9HBJ7 INGX-202ENST00000489074 768 ntBASIC16.4■□□□□ 0.22
USP29Q9HBJ7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 AC093214.1-201ENST00000511688 1107 ntBASIC16.4■□□□□ 0.22
USP29Q9HBJ7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 AC190387.1-201ENST00000551683 408 ntBASIC16.4■□□□□ 0.22
USP29Q9HBJ7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
USP29Q9HBJ7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
USP29Q9HBJ7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.39■□□□□ 0.22
USP29Q9HBJ7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 CYP4F24P-201ENST00000586049 1580 ntBASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AC009090.5-201ENST00000624886 2285 ntBASIC16.39■□□□□ 0.21
USP29Q9HBJ7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AC055876.3-201ENST00000431496 288 ntBASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AC138649.4-201ENST00000612222 287 ntBASIC16.39■□□□□ 0.21
USP29Q9HBJ7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 UXT-AS1-201ENST00000590504 1525 ntBASIC16.39■□□□□ 0.21
USP29Q9HBJ7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP29Q9HBJ7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms