Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 FAM58DP-201ENST00000428076 619 ntBASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 AC093520.2-201ENST00000561830 333 ntBASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 AL450472.2-201ENST00000603663 1156 ntBASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC40Q9H9A6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 AC018529.1-201ENST00000613063 361 ntBASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 AC068587.6-202ENST00000641839 5619 ntBASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 AC136621.1-201ENST00000624017 2304 ntBASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LRRC40Q9H9A6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 AC087481.3-201ENST00000602886 1894 ntBASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LRRC40Q9H9A6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms