Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 IGHJ2P-201ENST00000454480 60 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AC026410.3-201ENST00000514280 936 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 RNA5SP423-201ENST00000517127 109 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 HNRNPUP1-201ENST00000554987 333 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 AC025279.2-201ENST00000569730 653 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AL450472.2-201ENST00000603663 1156 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 UBALD1-205ENST00000590891 2641 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 AP001282.1-201ENST00000531301 1499 ntBASIC17.27■□□□□ 0.36
HIPK3Q9H422 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 AC093813.1-201ENST00000605066 256 ntBASIC17.27■□□□□ 0.36
HIPK3Q9H422 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.27■□□□□ 0.36
HIPK3Q9H422 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HIPK3Q9H422 REXO1L1P-202ENST00000608646 1974 ntBASIC17.27■□□□□ 0.36
HIPK3Q9H422 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.27■□□□□ 0.36
HIPK3Q9H422 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
HIPK3Q9H422 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.27■□□□□ 0.35
HIPK3Q9H422 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
HIPK3Q9H422 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HIPK3Q9H422 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 AP001582.1-201ENST00000525856 295 ntBASIC17.26■□□□□ 0.35
HIPK3Q9H422 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HIPK3Q9H422 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.26■□□□□ 0.35
HIPK3Q9H422 AL021578.1-201ENST00000613646 709 ntBASIC17.26■□□□□ 0.35
HIPK3Q9H422 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 AC138951.2-201ENST00000623455 1161 ntBASIC17.26■□□□□ 0.35
HIPK3Q9H422 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.26■□□□□ 0.35
HIPK3Q9H422 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms