Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 AL078644.1-201ENST00000609881 752 ntBASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 PMS2P7-201ENST00000506558 1336 ntBASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 LINC02228-204ENST00000642115 2962 ntBASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COMMD4Q9H0A8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 KRT18P67-201ENST00000432816 1264 ntBASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 FAM197Y8-203ENST00000450145 560 ntBASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 EMBP1-201ENST00000458200 901 ntBASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 AC108751.1-201ENST00000490852 363 ntBASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 AL009183.1-201ENST00000603760 355 ntBASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.12□□□□□ -0.15
COMMD4Q9H0A8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 AC105250.1-201ENST00000509378 2057 ntBASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COMMD4Q9H0A8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms