Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC079776.2-201ENST00000641154 1609 ntBASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SLIRPQ9GZT3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 HCG4-201ENST00000418983 998 ntBASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 TSPY22P-201ENST00000427496 604 ntBASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 ITM2C-210ENST00000620962 501 ntBASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SLIRPQ9GZT3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 AC105206.1-202ENST00000314927 2368 ntBASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 MST1P2-201ENST00000457982 2291 ntBASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 AL645939.2-201ENST00000427340 991 ntBASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SPDYE13P-201ENST00000445314 798 ntBASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 KRT18P38-201ENST00000449496 1282 ntBASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SLC25A6P2-201ENST00000497974 877 ntBASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 AC107918.2-201ENST00000530817 355 ntBASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLIRPQ9GZT3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14□□□□□ -0.17
SLIRPQ9GZT3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14□□□□□ -0.17
SLIRPQ9GZT3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
SLIRPQ9GZT3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms