Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AC112693.3-201ENST00000624819 1983 ntBASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NKX6-2Q9C056 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 AC125634.1-201ENST00000438758 1403 ntBASIC12.96□□□□□ -0.33
NKX6-2Q9C056 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.96□□□□□ -0.33
NKX6-2Q9C056 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 STARP1-201ENST00000397973 869 ntBASIC12.96□□□□□ -0.33
NKX6-2Q9C056 MIR935-201ENST00000401179 91 ntBASIC12.96□□□□□ -0.33
NKX6-2Q9C056 AL158047.1-201ENST00000445918 881 ntBASIC12.96□□□□□ -0.33
NKX6-2Q9C056 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 AC010947.1-201ENST00000623454 693 ntBASIC12.96□□□□□ -0.33
NKX6-2Q9C056 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX6-2Q9C056 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX6-2Q9C056 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX6-2Q9C056 C18orf15-201ENST00000623680 2534 ntBASIC12.96□□□□□ -0.34
NKX6-2Q9C056 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.96□□□□□ -0.34
NKX6-2Q9C056 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.96□□□□□ -0.34
NKX6-2Q9C056 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX6-2Q9C056 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX6-2Q9C056 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
NKX6-2Q9C056 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms