Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 RHOQP2-201ENST00000449922 579 ntBASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 RN7SL121P-201ENST00000584223 273 ntBASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 MIR6769A-201ENST00000617340 73 ntBASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
COL25A1Q9BXS0 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 RN7SL494P-201ENST00000461517 304 ntBASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 AP000911.2-201ENST00000534330 502 ntBASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 AC005041.3-201ENST00000606287 649 ntBASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.68■□□□□ 0.1
COL25A1Q9BXS0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 AC090820.1-201ENST00000519722 591 ntBASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 AC106820.3-201ENST00000561653 397 ntBASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 AC120498.5-201ENST00000561757 299 ntBASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 MEG3_2.1-201ENST00000611456 105 ntBASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COL25A1Q9BXS0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COL25A1Q9BXS0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms