Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NPAS2Q99743 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NPAS2Q99743 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPAS2Q99743 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS2Q99743 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS2Q99743 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPAS2Q99743 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 CICP24-201ENST00000605464 2705 ntBASIC15.65■□□□□ 0.1
NPAS2Q99743 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NPAS2Q99743 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS2Q99743 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS2Q99743 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS2Q99743 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.65■□□□□ 0.1
NPAS2Q99743 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.65■□□□□ 0.1
NPAS2Q99743 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPAS2Q99743 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
NPAS2Q99743 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS2Q99743 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS2Q99743 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NPAS2Q99743 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NPAS2Q99743 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.65■□□□□ 0.1
NPAS2Q99743 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.65■□□□□ 0.1
NPAS2Q99743 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPAS2Q99743 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NPAS2Q99743 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.64■□□□□ 0.09
NPAS2Q99743 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS2Q99743 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPAS2Q99743 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 AC254562.1-201ENST00000417586 456 ntBASIC15.64■□□□□ 0.09
NPAS2Q99743 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.64■□□□□ 0.09
NPAS2Q99743 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
NPAS2Q99743 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS2Q99743 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 FAM45BP-202ENST00000592932 1624 ntBASIC15.64■□□□□ 0.09
NPAS2Q99743 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NPAS2Q99743 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.64■□□□□ 0.09
NPAS2Q99743 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPAS2Q99743 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms