Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC133963.1-201ENST00000504166 1679 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 EEF1DP5-201ENST00000431410 772 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 NME6-208ENST00000435684 599 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RPS18P9-201ENST00000482817 460 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC068867.1-201ENST00000559855 150 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AL353708.1-201ENST00000567904 1257 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AL109837.1-201ENST00000603272 613 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC010632.2-201ENST00000588369 1224 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC013467.2-201ENST00000605472 835 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC144522.1-201ENST00000625111 1658 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 FDPSP7-201ENST00000429043 1054 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 BPIFB5P-201ENST00000457066 1099 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RN7SL578P-201ENST00000477781 283 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC025186.1-201ENST00000478174 870 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RPS23-204ENST00000507980 836 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 HNRNPA1P7-201ENST00000521273 963 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC078814.4-201ENST00000546650 327 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC112220.4-201ENST00000604982 1263 ntBASIC4.68□□□□□ -1.66
HMCN1Q96RW7 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC4.68□□□□□ -1.66
HMCN1Q96RW7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 AC004910.1-201ENST00000433493 787 ntBASIC4.67□□□□□ -1.66
HMCN1Q96RW7 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 FAM86B3P-203ENST00000523992 854 ntBASIC4.67□□□□□ -1.66
HMCN1Q96RW7 AP003040.1-201ENST00000532044 1024 ntBASIC4.67□□□□□ -1.66
HMCN1Q96RW7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 PHBP15-201ENST00000574228 665 ntBASIC4.67□□□□□ -1.66
HMCN1Q96RW7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMCN1Q96RW7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms