Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 PGAM1P5-201ENST00000548011 764 ntBASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 RN7SL596P-201ENST00000582123 288 ntBASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD1Q96PZ7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 TARDBPP1-201ENST00000442013 1203 ntBASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 AC005730.2-201ENST00000564549 1184 ntBASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 AP003392.6-201ENST00000607709 325 ntBASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD1Q96PZ7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 RN7SL774P-201ENST00000577467 290 ntBASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 AC234782.1-201ENST00000451950 919 ntBASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD1Q96PZ7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms