Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 MIR6775-201ENST00000617557 69 ntBASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 CU634019.7-201ENST00000624153 1185 ntBASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 FP236241.2-201ENST00000624906 1185 ntBASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 AL596087.1-201ENST00000400979 1969 ntBASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC85AQ96PX6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 AC119751.2-201ENST00000504529 210 ntBASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 SLED1-202ENST00000512051 380 ntBASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 MIR6805-201ENST00000615055 62 ntBASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC85AQ96PX6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 ANKRD19P-201ENST00000338192 862 ntBASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 AC106886.1-201ENST00000568660 600 ntBASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 AC133539.2-201ENST00000604757 467 ntBASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 KRT8P22-201ENST00000562317 1415 ntBASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC85AQ96PX6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC85AQ96PX6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms