Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 AL590326.2-201ENST00000625139 305 ntBASIC12.13□□□□□ -0.47
AP1S3Q96PC3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 TOP3BP1-201ENST00000420768 1380 ntBASIC12.13□□□□□ -0.47
AP1S3Q96PC3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 POU5F1P6-201ENST00000466990 990 ntBASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AC091607.1-201ENST00000490318 1060 ntBASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AP005901.3-202ENST00000581653 237 ntBASIC12.12□□□□□ -0.47
AP1S3Q96PC3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AC004817.3-201ENST00000602957 2129 ntBASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AC010331.1-201ENST00000611423 582 ntBASIC12.12□□□□□ -0.47
AP1S3Q96PC3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AC114341.1-201ENST00000618070 349 ntBASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AL359183.1-201ENST00000623796 2132 ntBASIC12.12□□□□□ -0.47
AP1S3Q96PC3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AC233702.3-201ENST00000578656 1387 ntBASIC12.12□□□□□ -0.47
AP1S3Q96PC3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
AP1S3Q96PC3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.11□□□□□ -0.47
AP1S3Q96PC3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms