Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 DUX4L45-201ENST00000566406 1057 ntBASIC16.8■□□□□ 0.28
CASD1Q96PB1 AC025279.2-201ENST00000569730 653 ntBASIC16.8■□□□□ 0.28
CASD1Q96PB1 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 AP005019.2-201ENST00000615104 511 ntBASIC16.8■□□□□ 0.28
CASD1Q96PB1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.8■□□□□ 0.28
CASD1Q96PB1 AL133338.1-201ENST00000565695 1517 ntBASIC16.8■□□□□ 0.28
CASD1Q96PB1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CASD1Q96PB1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 AC020907.1-201ENST00000616460 1350 ntBASIC16.79■□□□□ 0.28
CASD1Q96PB1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.79■□□□□ 0.28
CASD1Q96PB1 RPL13AP20-201ENST00000459725 609 ntBASIC16.79■□□□□ 0.28
CASD1Q96PB1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CASD1Q96PB1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CASD1Q96PB1 AL596087.1-201ENST00000400979 1969 ntBASIC16.78■□□□□ 0.28
CASD1Q96PB1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 AL138799.1-201ENST00000448213 1675 ntBASIC16.78■□□□□ 0.28
CASD1Q96PB1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.78■□□□□ 0.28
CASD1Q96PB1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CASD1Q96PB1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.77■□□□□ 0.28
CASD1Q96PB1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.77■□□□□ 0.28
CASD1Q96PB1 AC092364.2-201ENST00000596710 2692 ntBASIC16.77■□□□□ 0.28
CASD1Q96PB1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.77■□□□□ 0.28
CASD1Q96PB1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.77■□□□□ 0.28
CASD1Q96PB1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CASD1Q96PB1 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms