Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 AL603832.2-201ENST00000566195 2125 ntBASIC17.12■□□□□ 0.33
SNX27Q96L92 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX27Q96L92 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX27Q96L92 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX27Q96L92 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SNX27Q96L92 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX27Q96L92 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
SNX27Q96L92 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX27Q96L92 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SNX27Q96L92 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX27Q96L92 AC024909.3-201ENST00000611513 2257 ntBASIC17.11■□□□□ 0.33
SNX27Q96L92 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.11■□□□□ 0.33
SNX27Q96L92 TOMM22P5-201ENST00000416399 439 ntBASIC17.11■□□□□ 0.33
SNX27Q96L92 AC098850.1-201ENST00000419919 790 ntBASIC17.11■□□□□ 0.33
SNX27Q96L92 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.11■□□□□ 0.33
SNX27Q96L92 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.11■□□□□ 0.33
SNX27Q96L92 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.11■□□□□ 0.33
SNX27Q96L92 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.11■□□□□ 0.33
SNX27Q96L92 AC123567.1-201ENST00000548294 1261 ntBASIC17.11■□□□□ 0.33
SNX27Q96L92 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.11■□□□□ 0.33
SNX27Q96L92 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX27Q96L92 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX27Q96L92 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 AC018695.7-201ENST00000624587 2492 ntBASIC17.11■□□□□ 0.33
SNX27Q96L92 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX27Q96L92 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX27Q96L92 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX27Q96L92 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX27Q96L92 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.11■□□□□ 0.33
SNX27Q96L92 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX27Q96L92 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 AC112504.1-201ENST00000623415 1841 ntBASIC17.1■□□□□ 0.33
SNX27Q96L92 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 MYCLP2-201ENST00000449268 967 ntBASIC17.1■□□□□ 0.33
SNX27Q96L92 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 RNA5SP423-201ENST00000517127 109 ntBASIC17.1■□□□□ 0.33
SNX27Q96L92 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.1■□□□□ 0.33
SNX27Q96L92 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
SNX27Q96L92 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SNX27Q96L92 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNX27Q96L92 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX27Q96L92 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX27Q96L92 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX27Q96L92 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SNX27Q96L92 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNX27Q96L92 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SNX27Q96L92 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX27Q96L92 ELK1P1-201ENST00000485699 580 ntBASIC17.09■□□□□ 0.33
SNX27Q96L92 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.09■□□□□ 0.33
SNX27Q96L92 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.09■□□□□ 0.33
SNX27Q96L92 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.09■□□□□ 0.33
SNX27Q96L92 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.09■□□□□ 0.33
SNX27Q96L92 MIR4313-201ENST00000580760 101 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms