Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 AC018892.3-201ENST00000623986 2499 ntBASIC16.86■□□□□ 0.29
TRIM11Q96F44 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM11Q96F44 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM11Q96F44 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 AC013268.4-201ENST00000637413 2228 ntBASIC16.85■□□□□ 0.29
TRIM11Q96F44 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 KRT18P32-201ENST00000424695 1287 ntBASIC16.85■□□□□ 0.29
TRIM11Q96F44 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 YBX1P5-201ENST00000509441 847 ntBASIC16.85■□□□□ 0.29
TRIM11Q96F44 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 AL513210.1-201ENST00000629608 234 ntBASIC16.85■□□□□ 0.29
TRIM11Q96F44 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 AC090616.6-203ENST00000579186 1945 ntBASIC16.85■□□□□ 0.29
TRIM11Q96F44 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM11Q96F44 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM11Q96F44 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 ALG1L8P-201ENST00000533887 760 ntBASIC16.84■□□□□ 0.29
TRIM11Q96F44 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.84■□□□□ 0.29
TRIM11Q96F44 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TRIM11Q96F44 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM11Q96F44 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms