Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CICP24-201ENST00000605464 2705 ntBASIC15.37■□□□□ 0.05
VPS33AQ96AX1 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VPS33AQ96AX1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.36■□□□□ 0.05
VPS33AQ96AX1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 AC097376.2-205ENST00000610159 5334 ntBASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 AC092474.2-201ENST00000424288 719 ntBASIC15.36■□□□□ 0.05
VPS33AQ96AX1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 MIR4321-201ENST00000592276 80 ntBASIC15.36■□□□□ 0.05
VPS33AQ96AX1 AC010507.1-201ENST00000633895 436 ntBASIC15.36■□□□□ 0.05
VPS33AQ96AX1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.36■□□□□ 0.05
VPS33AQ96AX1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AC106881.1-201ENST00000605849 3329 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AP001282.1-201ENST00000531301 1499 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AC112693.3-201ENST00000624819 1983 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AC018892.3-201ENST00000623986 2499 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 CRYGEP-201ENST00000412192 528 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AC098831.1-202ENST00000438821 336 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AC009947.1-201ENST00000444350 727 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 HCG4B-203ENST00000450128 991 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 AC002347.1-201ENST00000569543 541 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms