Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 CNN2P8-201ENST00000421872 913 ntBASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAPGEF4Q8WZA2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 AC025279.2-201ENST00000569730 653 ntBASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 AC243960.2-201ENST00000600996 747 ntBASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.67■□□□□ 0.9
RAPGEF4Q8WZA2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 AC022211.2-201ENST00000585075 2527 ntBASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 MIR648-201ENST00000385046 94 ntBASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAPGEF4Q8WZA2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 AC023310.1-201ENST00000554836 735 ntBASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 AC091271.1-201ENST00000611877 1162 ntBASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.65■□□□□ 0.9
RAPGEF4Q8WZA2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAPGEF4Q8WZA2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAPGEF4Q8WZA2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAPGEF4Q8WZA2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAPGEF4Q8WZA2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RAPGEF4Q8WZA2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAPGEF4Q8WZA2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.64■□□□□ 0.89
RAPGEF4Q8WZA2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms