Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 SLC22A20-204ENST00000530038 1673 ntBASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40AQ8WXH6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AP003680.1-201ENST00000598970 3660 ntBASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AL365209.1-201ENST00000624418 6473 ntBASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 SLC25A6P2-201ENST00000497974 877 ntBASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 KRT19P2-202ENST00000557173 1012 ntBASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 PDPK2P-202ENST00000562415 1191 ntBASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AC005829.1-201ENST00000570002 483 ntBASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AL513190.1-201ENST00000621254 727 ntBASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40AQ8WXH6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms