Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 AC005616.1-201ENST00000592931 579 ntTSL 4 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 UBXN8-209ENST00000620074 1058 ntTSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CICP9-201ENST00000444451 1913 ntBASIC9.73□□□□□ -0.85
SVIPQ8NHG7 TMEM179-206ENST00000616017 1645 ntBASIC9.73□□□□□ -0.85
SVIPQ8NHG7 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 ENDOU-202ENST00000422538 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 GGPS1-201ENST00000282841 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 CAPN9-203ENST00000366666 2173 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SVIPQ8NHG7 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 SLC8A3-201ENST00000216568 2916 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 AP002414.2-202ENST00000590929 1450 ntBASIC9.72□□□□□ -0.85
SVIPQ8NHG7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 PAPD4-207ENST00000504233 2997 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 DENND2A-209ENST00000496613 3562 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 AC084782.1-201ENST00000564401 2465 ntBASIC9.72□□□□□ -0.85
SVIPQ8NHG7 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 AC090142.2-201ENST00000483263 416 ntBASIC9.72□□□□□ -0.85
SVIPQ8NHG7 AC010503.4-201ENST00000615487 688 ntBASIC9.72□□□□□ -0.85
SVIPQ8NHG7 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 AL596275.2-201ENST00000641749 1706 ntBASIC9.72□□□□□ -0.85
SVIPQ8NHG7 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 AKNAD1-202ENST00000369995 2641 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 TCEANC2-203ENST00000391366 1783 ntBASIC9.72□□□□□ -0.85
SVIPQ8NHG7 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 ZNF133-214ENST00000628216 2318 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 AP004782.1-201ENST00000623990 3433 ntBASIC9.72□□□□□ -0.85
SVIPQ8NHG7 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms