Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CYMP-203ENST00000474680 1263 ntBASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 AC097493.3-201ENST00000509725 367 ntBASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC148Q8NFR7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 RN7SL618P-201ENST00000477850 296 ntBASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 AL033527.5-202ENST00000641632 1098 ntBASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC148Q8NFR7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 AC055876.3-201ENST00000431496 288 ntBASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 HIST3H2BA-201ENST00000436555 524 ntBASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 AC138649.4-201ENST00000612222 287 ntBASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 AC068587.6-202ENST00000641839 5619 ntBASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC148Q8NFR7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC148Q8NFR7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms