Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 AC099336.1-201ENST00000417053 1171 ntBASIC19.44■□□□□ 0.7
RTL9Q8NET4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 PTP4A1P2-201ENST00000546033 454 ntBASIC19.44■□□□□ 0.7
RTL9Q8NET4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 AP001063.1-201ENST00000568332 529 ntBASIC19.44■□□□□ 0.7
RTL9Q8NET4 AC009486.1-201ENST00000569860 813 ntBASIC19.44■□□□□ 0.7
RTL9Q8NET4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.44■□□□□ 0.7
RTL9Q8NET4 AL022328.1-201ENST00000610050 478 ntBASIC19.44■□□□□ 0.7
RTL9Q8NET4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTL9Q8NET4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 AC124067.4-201ENST00000519691 2379 ntBASIC19.43■□□□□ 0.7
RTL9Q8NET4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 AC012441.1-201ENST00000446669 685 ntBASIC19.43■□□□□ 0.7
RTL9Q8NET4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 AC107373.2-201ENST00000607735 490 ntBASIC19.43■□□□□ 0.7
RTL9Q8NET4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.43■□□□□ 0.7
RTL9Q8NET4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL9Q8NET4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 FAM8A2P-201ENST00000528813 1142 ntBASIC19.42■□□□□ 0.7
RTL9Q8NET4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL9Q8NET4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RTL9Q8NET4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms