Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CFAP43Q8NDM7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC24.39■■□□□ 1.5
CFAP43Q8NDM7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
CFAP43Q8NDM7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 DRD5P1-201ENST00000456605 1438 ntBASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 AC091046.1-201ENST00000331871 207 ntBASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CFAP43Q8NDM7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 RN7SL769P-201ENST00000469386 295 ntBASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 GAPDHP40-201ENST00000505218 1006 ntBASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 MBP-227ENST00000526111 581 ntTSL 4 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CFAP43Q8NDM7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 MIR1202-201ENST00000408529 83 ntBASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AL138709.1-201ENST00000614840 1693 ntBASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AC092978.1-202ENST00000637590 1327 ntBASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AP001505.2-201ENST00000616815 443 ntBASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CFAP43Q8NDM7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CFAP43Q8NDM7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CFAP43Q8NDM7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CFAP43Q8NDM7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms