Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 KRT8P12-202ENST00000472924 1397 ntBASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.79□□□□□ -0.04
CDRT4Q8N9R6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 AZGP1P1-201ENST00000411909 902 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 CNN2P2-201ENST00000443536 909 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 CNN2P3-201ENST00000450201 906 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 HNRNPUP1-201ENST00000554987 333 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 AC025678.2-201ENST00000562061 970 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 AL136317.3-201ENST00000618497 906 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 CETN4P-206ENST00000642099 2168 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 AC092850.2-201ENST00000623821 2697 ntBASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.78□□□□□ -0.04
CDRT4Q8N9R6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 AC063926.3-201ENST00000624734 5658 ntBASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CDRT4Q8N9R6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms