Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 AZGP1P1-201ENST00000411909 902 ntBASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 AC084346.2-201ENST00000607097 949 ntBASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 AC020907.1-201ENST00000616460 1350 ntBASIC16.13■□□□□ 0.17
SYNPOQ8N3V7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 PCDH8P1-201ENST00000428983 2773 ntBASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 TARDBPP1-201ENST00000442013 1203 ntBASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 BCRP2-202ENST00000447763 634 ntBASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 BCRP6-201ENST00000510112 632 ntBASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 BCRP7-201ENST00000511549 544 ntBASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 AP001889.1-201ENST00000525414 633 ntBASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 INTS4P2-202ENST00000614726 2019 ntBASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 NFIC-211ENST00000641145 8399 ntBASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SYNPOQ8N3V7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AL592424.1-201ENST00000563624 1536 ntBASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 PFN1P12-201ENST00000455938 534 ntBASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AC124283.3-201ENST00000570869 594 ntBASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AC103810.3-201ENST00000583567 96 ntBASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SYNPOQ8N3V7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms