Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 AC243562.2-201ENST00000561247 970 ntBASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 RN7SL204P-201ENST00000582831 262 ntBASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 AC138761.1-201ENST00000584393 385 ntBASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 LINC02560-201ENST00000596379 459 ntBASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 AC008761.3-201ENST00000624803 892 ntBASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM48Q8IWZ4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 CYP4F24P-201ENST00000586049 1580 ntBASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 AC004233.3-201ENST00000607794 1269 ntBASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM48Q8IWZ4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 AL136982.4-201ENST00000437689 1740 ntBASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM48Q8IWZ4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms