Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 AC245100.5-201ENST00000452108 331 ntBASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC50Q8IVM0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC50Q8IVM0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC50Q8IVM0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC50Q8IVM0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CCDC50Q8IVM0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC50Q8IVM0 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 AC074386.1-202ENST00000463561 864 ntBASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 AC002347.1-201ENST00000569543 541 ntBASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC50Q8IVM0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms