Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 LDHBP1-201ENST00000455730 1119 ntBASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 RN7SL720P-201ENST00000488178 304 ntBASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 AC244157.2-201ENST00000616239 1006 ntBASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 AP001505.2-201ENST00000616815 443 ntBASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 ALOX12P2-203ENST00000570921 1945 ntBASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT28Q7Z3Y7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 MIR33B-201ENST00000385104 96 ntBASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 MIR769-201ENST00000390225 118 ntBASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 AC079178.1-201ENST00000420915 656 ntBASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 SERPINA13P-202ENST00000478994 924 ntBASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 AC138649.2-201ENST00000615886 705 ntBASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
KRT28Q7Z3Y7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 AC104457.1-201ENST00000401024 814 ntBASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 AL133466.1-201ENST00000447582 150 ntBASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 ME2P1-201ENST00000426028 1970 ntBASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT28Q7Z3Y7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KRT28Q7Z3Y7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms