Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 PGAM5P1-201ENST00000518923 814 ntBASIC14.79□□□□□ -0.04
TUBA1AQ71U36 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 LINC00528-201ENST00000600723 2160 ntBASIC14.79□□□□□ -0.04
TUBA1AQ71U36 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 AC004877.2-201ENST00000623941 599 ntBASIC14.79□□□□□ -0.04
TUBA1AQ71U36 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.79□□□□□ -0.04
TUBA1AQ71U36 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 REXO1L8P-201ENST00000604378 1897 ntBASIC14.78□□□□□ -0.04
TUBA1AQ71U36 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 AC129492.6-201ENST00000611383 1305 ntBASIC14.78□□□□□ -0.04
TUBA1AQ71U36 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 FAM185BP-201ENST00000443595 716 ntBASIC14.78□□□□□ -0.04
TUBA1AQ71U36 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.78□□□□□ -0.04
TUBA1AQ71U36 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 KRT8P49-201ENST00000604166 1432 ntBASIC14.77□□□□□ -0.04
TUBA1AQ71U36 AC025580.3-201ENST00000617932 1424 ntBASIC14.77□□□□□ -0.04
TUBA1AQ71U36 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.77□□□□□ -0.04
TUBA1AQ71U36 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TUBA1AQ71U36 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TUBA1AQ71U36 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.77□□□□□ -0.05
TUBA1AQ71U36 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.77□□□□□ -0.05
TUBA1AQ71U36 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TUBA1AQ71U36 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms