Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 AC109462.3-201ENST00000573934 613 ntBASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
FOXR1Q6PIV2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXR1Q6PIV2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
FOXR1Q6PIV2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.71■□□□□ 0.26
FOXR1Q6PIV2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
FOXR1Q6PIV2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
FOXR1Q6PIV2 NORAD-201ENST00000565493 5339 ntBASIC16.71■□□□□ 0.26
FOXR1Q6PIV2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXR1Q6PIV2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
FOXR1Q6PIV2 TUBB8P12-201ENST00000308911 1335 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 TUBB7P-202ENST00000428444 1305 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 TUBB8P7-204ENST00000567960 1332 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 TMBIM7P-203ENST00000641617 1718 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 AL390755.1-201ENST00000623716 2027 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 HCG4B-203ENST00000450128 991 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 YBX1P5-201ENST00000509441 847 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 AP002472.1-201ENST00000577490 586 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 BCAR1-209ENST00000546196 1340 ntBASIC16.7■□□□□ 0.26
FOXR1Q6PIV2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AL049757.1-201ENST00000616842 1596 ntBASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AL353593.2-201ENST00000602529 1483 ntBASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AC003669.1-201ENST00000334569 611 ntBASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 STK19B-204ENST00000512515 211 ntBASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 IGHV3-65-201ENST00000523210 341 ntBASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 AC008667.4-201ENST00000607370 168 ntBASIC16.69■□□□□ 0.26
FOXR1Q6PIV2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms