Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 TIMM17BP1-201ENST00000545713 516 ntBASIC18.87■□□□□ 0.61
CTR9Q6PD62 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.87■□□□□ 0.61
CTR9Q6PD62 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTR9Q6PD62 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 AL603832.2-201ENST00000566195 2125 ntBASIC18.86■□□□□ 0.61
CTR9Q6PD62 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 AL607033.1-201ENST00000623900 1599 ntBASIC18.86■□□□□ 0.61
CTR9Q6PD62 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 MEIS3P1-201ENST00000495167 958 ntBASIC18.86■□□□□ 0.61
CTR9Q6PD62 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.86■□□□□ 0.61
CTR9Q6PD62 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTR9Q6PD62 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 AC024909.3-201ENST00000611513 2257 ntBASIC18.85■□□□□ 0.61
CTR9Q6PD62 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 AL391825.1-201ENST00000457671 1364 ntBASIC18.85■□□□□ 0.61
CTR9Q6PD62 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms