Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL844908.2-201ENST00000609461 460 ntBASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.63■□□□□ 0.25
RFWD3Q6PCD5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC236430.1-201ENST00000402231 743 ntBASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AL512361.1-201ENST00000554200 418 ntBASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 RN7SL204P-201ENST00000582831 262 ntBASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC022144.1-201ENST00000602255 1580 ntBASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC087499.5-201ENST00000452760 1342 ntBASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 KRT8P12-202ENST00000472924 1397 ntBASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
RFWD3Q6PCD5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 AC009407.1-201ENST00000568958 598 ntBASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.61■□□□□ 0.25
RFWD3Q6PCD5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms