Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 AC069262.1-201ENST00000539058 672 ntBASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 AC026150.2-201ENST00000564693 1156 ntBASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL1Q6NVV3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 MTHFR-217ENST00000641820 1569 ntBASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 SPDYE14P-201ENST00000442619 822 ntBASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 AC061975.2-201ENST00000581722 295 ntBASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL1Q6NVV3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NIPAL1Q6NVV3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms