Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ODF4Q2M2E3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 AC009947.1-201ENST00000444350 727 ntBASIC14.17□□□□□ -0.14
ODF4Q2M2E3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 AC116407.3-201ENST00000623905 1129 ntBASIC14.17□□□□□ -0.14
ODF4Q2M2E3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ODF4Q2M2E3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 AC087481.3-201ENST00000602886 1894 ntBASIC14.16□□□□□ -0.14
ODF4Q2M2E3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 AC023157.3-201ENST00000619086 2088 ntBASIC14.16□□□□□ -0.14
ODF4Q2M2E3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 AL009183.1-201ENST00000603760 355 ntBASIC14.16□□□□□ -0.14
ODF4Q2M2E3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ODF4Q2M2E3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms