Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 AL607033.1-201ENST00000623900 1599 ntBASIC20.67■□□□□ 0.9
CALD1Q05682 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
CALD1Q05682 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALD1Q05682 AC022188.1-201ENST00000620960 1664 ntBASIC20.67■□□□□ 0.9
CALD1Q05682 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CALD1Q05682 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.67■□□□□ 0.9
CALD1Q05682 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CALD1Q05682 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CALD1Q05682 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.66■□□□□ 0.9
CALD1Q05682 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.66■□□□□ 0.9
CALD1Q05682 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.66■□□□□ 0.9
CALD1Q05682 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CALD1Q05682 FAM8A3P-201ENST00000427218 844 ntBASIC20.66■□□□□ 0.9
CALD1Q05682 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.66■□□□□ 0.9
CALD1Q05682 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.66■□□□□ 0.9
CALD1Q05682 SLED1-202ENST00000512051 380 ntBASIC20.66■□□□□ 0.9
CALD1Q05682 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.66■□□□□ 0.9
CALD1Q05682 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.66■□□□□ 0.9
CALD1Q05682 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
CALD1Q05682 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.66■□□□□ 0.9
CALD1Q05682 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.66■□□□□ 0.9
CALD1Q05682 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.66■□□□□ 0.9
CALD1Q05682 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALD1Q05682 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CALD1Q05682 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.66■□□□□ 0.9
CALD1Q05682 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CALD1Q05682 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.65■□□□□ 0.9
CALD1Q05682 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 AC074338.1-201ENST00000416825 156 ntBASIC20.65■□□□□ 0.9
CALD1Q05682 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.65■□□□□ 0.9
CALD1Q05682 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.65■□□□□ 0.9
CALD1Q05682 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.65■□□□□ 0.9
CALD1Q05682 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 MIR4745-201ENST00000577608 62 ntBASIC20.65■□□□□ 0.9
CALD1Q05682 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.65■□□□□ 0.9
CALD1Q05682 AC092364.2-202ENST00000597012 1073 ntBASIC20.65■□□□□ 0.9
CALD1Q05682 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CALD1Q05682 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.65■□□□□ 0.9
CALD1Q05682 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CALD1Q05682 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.65■□□□□ 0.9
CALD1Q05682 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALD1Q05682 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALD1Q05682 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CALD1Q05682 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.64■□□□□ 0.9
CALD1Q05682 OVCH1-AS1-204ENST00000641955 5529 ntBASIC20.64■□□□□ 0.9
CALD1Q05682 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALD1Q05682 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALD1Q05682 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALD1Q05682 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CALD1Q05682 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.64■□□□□ 0.89
CALD1Q05682 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CALD1Q05682 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.64■□□□□ 0.89
CALD1Q05682 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.64■□□□□ 0.89
CALD1Q05682 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.64■□□□□ 0.89
CALD1Q05682 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CALD1Q05682 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.64■□□□□ 0.89
CALD1Q05682 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.64■□□□□ 0.89
CALD1Q05682 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CALD1Q05682 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.64■□□□□ 0.89
CALD1Q05682 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.64■□□□□ 0.89
CALD1Q05682 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms