Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 HNRNPUP1-201ENST00000554987 333 ntBASIC16.77■□□□□ 0.28
UBE3AQ05086 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.77■□□□□ 0.28
UBE3AQ05086 AC243960.2-201ENST00000600996 747 ntBASIC16.77■□□□□ 0.28
UBE3AQ05086 AC244669.2-201ENST00000612320 853 ntBASIC16.77■□□□□ 0.28
UBE3AQ05086 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.77■□□□□ 0.28
UBE3AQ05086 AL139099.5-201ENST00000635274 300 ntBASIC16.77■□□□□ 0.28
UBE3AQ05086 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE3AQ05086 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE3AQ05086 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBE3AQ05086 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
UBE3AQ05086 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE3AQ05086 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE3AQ05086 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE3AQ05086 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE3AQ05086 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
UBE3AQ05086 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.77■□□□□ 0.27
UBE3AQ05086 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.77■□□□□ 0.27
UBE3AQ05086 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.77■□□□□ 0.27
UBE3AQ05086 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE3AQ05086 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE3AQ05086 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE3AQ05086 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.77■□□□□ 0.27
UBE3AQ05086 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.77■□□□□ 0.27
UBE3AQ05086 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.77■□□□□ 0.27
UBE3AQ05086 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE3AQ05086 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBE3AQ05086 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE3AQ05086 AC099398.1-201ENST00000567919 2776 ntBASIC16.76■□□□□ 0.27
UBE3AQ05086 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBE3AQ05086 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.76■□□□□ 0.27
UBE3AQ05086 CNN2P8-201ENST00000421872 913 ntBASIC16.76■□□□□ 0.27
UBE3AQ05086 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBE3AQ05086 RPL13AP20-201ENST00000459725 609 ntBASIC16.76■□□□□ 0.27
UBE3AQ05086 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.76■□□□□ 0.27
UBE3AQ05086 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.76■□□□□ 0.27
UBE3AQ05086 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.76■□□□□ 0.27
UBE3AQ05086 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.76■□□□□ 0.27
UBE3AQ05086 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE3AQ05086 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE3AQ05086 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.76■□□□□ 0.27
UBE3AQ05086 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE3AQ05086 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 AC005915.1-201ENST00000624912 2018 ntBASIC16.75■□□□□ 0.27
UBE3AQ05086 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBE3AQ05086 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 REXO1L1P-202ENST00000608646 1974 ntBASIC16.75■□□□□ 0.27
UBE3AQ05086 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.75■□□□□ 0.27
UBE3AQ05086 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE3AQ05086 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 KRT8P13-201ENST00000463294 1010 ntBASIC16.75■□□□□ 0.27
UBE3AQ05086 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.75■□□□□ 0.27
UBE3AQ05086 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
UBE3AQ05086 MIR3615-201ENST00000581999 87 ntBASIC16.75■□□□□ 0.27
UBE3AQ05086 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE3AQ05086 AC091271.1-201ENST00000611877 1162 ntBASIC16.75■□□□□ 0.27
UBE3AQ05086 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.75■□□□□ 0.27
UBE3AQ05086 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.75■□□□□ 0.27
UBE3AQ05086 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE3AQ05086 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBE3AQ05086 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms