Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 ZNF890P-202ENST00000530367 1156 ntBASIC14.24□□□□□ -0.13
H3F3AP84243 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
H3F3AP84243 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.24□□□□□ -0.13
H3F3AP84243 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.24□□□□□ -0.13
H3F3AP84243 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.24□□□□□ -0.13
H3F3AP84243 AL390955.2-201ENST00000603032 514 ntBASIC14.24□□□□□ -0.13
H3F3AP84243 AC097359.3-201ENST00000603982 1210 ntBASIC14.24□□□□□ -0.13
H3F3AP84243 AC106028.4-201ENST00000614509 607 ntBASIC14.24□□□□□ -0.13
H3F3AP84243 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.24□□□□□ -0.13
H3F3AP84243 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H3F3AP84243 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.24□□□□□ -0.13
H3F3AP84243 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.24□□□□□ -0.13
H3F3AP84243 AC100757.3-201ENST00000622361 1406 ntBASIC14.24□□□□□ -0.13
H3F3AP84243 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3F3AP84243 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
H3F3AP84243 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
H3F3AP84243 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
H3F3AP84243 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3AP84243 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 TSSK5P-201ENST00000423978 907 ntBASIC14.23□□□□□ -0.13
H3F3AP84243 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.23□□□□□ -0.13
H3F3AP84243 HNRNPUP1-201ENST00000554987 333 ntBASIC14.23□□□□□ -0.13
H3F3AP84243 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3AP84243 MIR4313-201ENST00000580760 101 ntBASIC14.23□□□□□ -0.13
H3F3AP84243 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
H3F3AP84243 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.23□□□□□ -0.13
H3F3AP84243 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H3F3AP84243 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.23□□□□□ -0.13
H3F3AP84243 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3F3AP84243 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.23□□□□□ -0.13
H3F3AP84243 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H3F3AP84243 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3AP84243 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H3F3AP84243 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3AP84243 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H3F3AP84243 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
H3F3AP84243 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
H3F3AP84243 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 AC241585.1-201ENST00000433527 519 ntBASIC14.22□□□□□ -0.13
H3F3AP84243 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.22□□□□□ -0.13
H3F3AP84243 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3AP84243 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3AP84243 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.22□□□□□ -0.13
H3F3AP84243 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.22□□□□□ -0.13
H3F3AP84243 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3F3AP84243 AL512361.1-201ENST00000554200 418 ntBASIC14.22□□□□□ -0.13
H3F3AP84243 AC010336.2-201ENST00000564226 506 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms