Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 AL133215.2-201ENST00000609242 977 ntBASIC18.25■□□□□ 0.51
CHMP4BP1P59074 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 AL512652.2-201ENST00000625156 1716 ntBASIC18.25■□□□□ 0.51
CHMP4BP1P59074 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 AC104640.1-201ENST00000562617 2109 ntBASIC18.25■□□□□ 0.51
CHMP4BP1P59074 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP4BP1P59074 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 COX5BP8-201ENST00000416911 349 ntBASIC18.24■□□□□ 0.51
CHMP4BP1P59074 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 HLA-J-202ENST00000469281 1241 ntBASIC18.24■□□□□ 0.51
CHMP4BP1P59074 RN7SL618P-201ENST00000477850 296 ntBASIC18.24■□□□□ 0.51
CHMP4BP1P59074 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.24■□□□□ 0.51
CHMP4BP1P59074 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 OR8S1-201ENST00000310194 1080 ntBASIC18.23■□□□□ 0.51
CHMP4BP1P59074 SPDYE19P-201ENST00000338590 713 ntBASIC18.23■□□□□ 0.51
CHMP4BP1P59074 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 AC092384.3-202ENST00000564646 2873 ntBASIC18.23■□□□□ 0.51
CHMP4BP1P59074 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHMP4BP1P59074 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms