Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN6P56747 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
CLDN6P56747 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN6P56747 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.24■□□□□ 0.03
CLDN6P56747 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.24■□□□□ 0.03
CLDN6P56747 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLDN6P56747 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLDN6P56747 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CLDN6P56747 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
CLDN6P56747 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLDN6P56747 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN6P56747 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN6P56747 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN6P56747 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN6P56747 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN6P56747 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 GPAA1P2-201ENST00000417923 928 ntBASIC15.23■□□□□ 0.03
CLDN6P56747 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN6P56747 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN6P56747 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN6P56747 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.23■□□□□ 0.03
CLDN6P56747 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 AL118558.3-201ENST00000607414 1079 ntBASIC15.23■□□□□ 0.03
CLDN6P56747 AC091271.1-201ENST00000611877 1162 ntBASIC15.23■□□□□ 0.03
CLDN6P56747 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.23■□□□□ 0.03
CLDN6P56747 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN6P56747 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CLDN6P56747 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN6P56747 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN6P56747 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN6P56747 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN6P56747 GGT3P-204ENST00000453783 1664 ntBASIC15.22■□□□□ 0.03
CLDN6P56747 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN6P56747 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CLDN6P56747 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN6P56747 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN6P56747 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN6P56747 C1QBPP1-201ENST00000400117 770 ntBASIC15.22■□□□□ 0.03
CLDN6P56747 SOCS2P1-201ENST00000417727 557 ntBASIC15.22■□□□□ 0.03
CLDN6P56747 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN6P56747 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN6P56747 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN6P56747 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.22■□□□□ 0.03
CLDN6P56747 AP000812.2-201ENST00000538934 718 ntBASIC15.22■□□□□ 0.03
CLDN6P56747 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN6P56747 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN6P56747 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN6P56747 AL049840.4-201ENST00000602422 811 ntBASIC15.22■□□□□ 0.03
CLDN6P56747 AL365330.1-201ENST00000607459 531 ntBASIC15.22■□□□□ 0.03
CLDN6P56747 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN6P56747 KRT8P37-201ENST00000451609 1420 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms