Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 MIR4313-201ENST00000580760 101 ntBASIC15.51■□□□□ 0.07
AP1S2P56377 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.51■□□□□ 0.07
AP1S2P56377 AL691403.2-201ENST00000618460 490 ntBASIC15.51■□□□□ 0.07
AP1S2P56377 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
AP1S2P56377 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
AP1S2P56377 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.51■□□□□ 0.07
AP1S2P56377 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
AP1S2P56377 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP1S2P56377 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 AC020658.6-201ENST00000623564 1870 ntBASIC15.5■□□□□ 0.07
AP1S2P56377 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP1S2P56377 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.5■□□□□ 0.07
AP1S2P56377 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 MTND6P24-201ENST00000440466 518 ntBASIC15.5■□□□□ 0.07
AP1S2P56377 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
AP1S2P56377 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
AP1S2P56377 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP1S2P56377 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.5■□□□□ 0.07
AP1S2P56377 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.49■□□□□ 0.07
AP1S2P56377 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP1S2P56377 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
AP1S2P56377 AC136604.1-201ENST00000418535 575 ntBASIC15.49■□□□□ 0.07
AP1S2P56377 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 CNN2P2-201ENST00000443536 909 ntBASIC15.49■□□□□ 0.07
AP1S2P56377 CNN2P3-201ENST00000450201 906 ntBASIC15.49■□□□□ 0.07
AP1S2P56377 HNRNPUP1-201ENST00000554987 333 ntBASIC15.49■□□□□ 0.07
AP1S2P56377 AC025678.2-201ENST00000562061 970 ntBASIC15.49■□□□□ 0.07
AP1S2P56377 AL136317.3-201ENST00000618497 906 ntBASIC15.49■□□□□ 0.07
AP1S2P56377 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.49■□□□□ 0.07
AP1S2P56377 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
AP1S2P56377 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.49■□□□□ 0.07
AP1S2P56377 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.49■□□□□ 0.07
AP1S2P56377 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
AP1S2P56377 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
AP1S2P56377 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
AP1S2P56377 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
AP1S2P56377 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S2P56377 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
AP1S2P56377 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S2P56377 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
AP1S2P56377 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms