Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CACNB3P54284 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CACNB3P54284 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.71■□□□□ 0.59
CACNB3P54284 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.71■□□□□ 0.59
CACNB3P54284 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.71■□□□□ 0.59
CACNB3P54284 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.71■□□□□ 0.59
CACNB3P54284 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.71■□□□□ 0.59
CACNB3P54284 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.71■□□□□ 0.59
CACNB3P54284 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.71■□□□□ 0.59
CACNB3P54284 RNA5SP412-201ENST00000516234 123 ntBASIC18.71■□□□□ 0.59
CACNB3P54284 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.71■□□□□ 0.59
CACNB3P54284 MIR6787-201ENST00000616675 61 ntBASIC18.71■□□□□ 0.59
CACNB3P54284 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.71■□□□□ 0.59
CACNB3P54284 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 DRD5P1-201ENST00000456605 1438 ntBASIC18.71■□□□□ 0.59
CACNB3P54284 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.71■□□□□ 0.59
CACNB3P54284 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CACNB3P54284 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 TUBB1P2-201ENST00000422712 1306 ntBASIC18.71■□□□□ 0.59
CACNB3P54284 TUBB1P1-201ENST00000503144 1300 ntBASIC18.71■□□□□ 0.59
CACNB3P54284 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CACNB3P54284 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.71■□□□□ 0.59
CACNB3P54284 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.58
CACNB3P54284 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNB3P54284 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CACNB3P54284 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNB3P54284 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CACNB3P54284 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNB3P54284 FAM21FP-201ENST00000426241 1131 ntBASIC18.7■□□□□ 0.58
CACNB3P54284 AC016694.1-201ENST00000434179 700 ntBASIC18.7■□□□□ 0.58
CACNB3P54284 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNB3P54284 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNB3P54284 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CACNB3P54284 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CACNB3P54284 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CACNB3P54284 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 GNRHR2-203ENST00000581100 1187 ntBASIC18.7■□□□□ 0.58
CACNB3P54284 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNB3P54284 AC107373.2-201ENST00000607735 490 ntBASIC18.7■□□□□ 0.58
CACNB3P54284 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.7■□□□□ 0.58
CACNB3P54284 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.7■□□□□ 0.58
CACNB3P54284 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 OR6D1P-203ENST00000641209 4860 ntBASIC18.7■□□□□ 0.58
CACNB3P54284 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CACNB3P54284 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 KRT8P44-201ENST00000441609 1350 ntBASIC18.69■□□□□ 0.58
CACNB3P54284 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CACNB3P54284 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.69■□□□□ 0.58
CACNB3P54284 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.69■□□□□ 0.58
CACNB3P54284 AC026410.3-201ENST00000514280 936 ntBASIC18.69■□□□□ 0.58
CACNB3P54284 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 AP001582.1-201ENST00000525856 295 ntBASIC18.69■□□□□ 0.58
CACNB3P54284 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 KRT90P-201ENST00000549264 1064 ntBASIC18.69■□□□□ 0.58
CACNB3P54284 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.69■□□□□ 0.58
CACNB3P54284 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.69■□□□□ 0.58
CACNB3P54284 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CACNB3P54284 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.69■□□□□ 0.58
CACNB3P54284 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms