Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 AC136604.1-201ENST00000418535 575 ntBASIC14.88□□□□□ -0.03
EFNA3P52797 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.88□□□□□ -0.03
EFNA3P52797 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.88□□□□□ -0.03
EFNA3P52797 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.88□□□□□ -0.03
EFNA3P52797 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.88□□□□□ -0.03
EFNA3P52797 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
EFNA3P52797 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
EFNA3P52797 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.88□□□□□ -0.03
EFNA3P52797 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.88□□□□□ -0.03
EFNA3P52797 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
EFNA3P52797 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
EFNA3P52797 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.88□□□□□ -0.03
EFNA3P52797 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
EFNA3P52797 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
EFNA3P52797 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
EFNA3P52797 SLC7A15P-201ENST00000424028 1363 ntBASIC14.87□□□□□ -0.03
EFNA3P52797 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
EFNA3P52797 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.87□□□□□ -0.03
EFNA3P52797 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
EFNA3P52797 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
EFNA3P52797 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.87□□□□□ -0.03
EFNA3P52797 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.87□□□□□ -0.03
EFNA3P52797 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.87□□□□□ -0.03
EFNA3P52797 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.87□□□□□ -0.03
EFNA3P52797 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
EFNA3P52797 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.87□□□□□ -0.03
EFNA3P52797 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
EFNA3P52797 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.87□□□□□ -0.03
EFNA3P52797 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.87□□□□□ -0.03
EFNA3P52797 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 TP53TG3HP-202ENST00000569755 579 ntBASIC14.87□□□□□ -0.03
EFNA3P52797 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.87□□□□□ -0.03
EFNA3P52797 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.87□□□□□ -0.03
EFNA3P52797 AL450472.2-201ENST00000603663 1156 ntBASIC14.87□□□□□ -0.03
EFNA3P52797 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.87□□□□□ -0.03
EFNA3P52797 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
EFNA3P52797 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
EFNA3P52797 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.87□□□□□ -0.03
EFNA3P52797 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
EFNA3P52797 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
EFNA3P52797 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.86□□□□□ -0.03
EFNA3P52797 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EFNA3P52797 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.86□□□□□ -0.03
EFNA3P52797 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.86□□□□□ -0.03
EFNA3P52797 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 AC011477.6-201ENST00000604980 1927 ntBASIC14.86□□□□□ -0.03
EFNA3P52797 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
EFNA3P52797 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EFNA3P52797 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.86□□□□□ -0.03
EFNA3P52797 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
EFNA3P52797 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
EFNA3P52797 DGCR5-201ENST00000399539 862 ntBASIC14.86□□□□□ -0.03
EFNA3P52797 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.86□□□□□ -0.03
EFNA3P52797 DFFBP1-201ENST00000433250 979 ntBASIC14.86□□□□□ -0.03
EFNA3P52797 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 TPRX2P-201ENST00000535362 881 ntBASIC14.86□□□□□ -0.03
EFNA3P52797 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
EFNA3P52797 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
EFNA3P52797 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.86□□□□□ -0.03
EFNA3P52797 MIR8072-201ENST00000614241 80 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms