Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC024243.1-201ENST00000609234 778 ntBASIC15.69■□□□□ 0.1
GTF2A1P52655 AC026471.5-201ENST00000615068 467 ntBASIC15.69■□□□□ 0.1
GTF2A1P52655 AL049637.2-201ENST00000641778 930 ntBASIC15.69■□□□□ 0.1
GTF2A1P52655 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 AC008677.1-201ENST00000519230 1561 ntBASIC15.69■□□□□ 0.1
GTF2A1P52655 INTS4P1-203ENST00000641008 3683 ntBASIC15.69■□□□□ 0.1
GTF2A1P52655 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.69■□□□□ 0.1
GTF2A1P52655 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.69■□□□□ 0.1
GTF2A1P52655 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC15.69■□□□□ 0.1
GTF2A1P52655 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GTF2A1P52655 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.68■□□□□ 0.1
GTF2A1P52655 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 CCR12P-201ENST00000446203 998 ntBASIC15.68■□□□□ 0.1
GTF2A1P52655 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.68■□□□□ 0.1
GTF2A1P52655 HLA-J-202ENST00000469281 1241 ntBASIC15.68■□□□□ 0.1
GTF2A1P52655 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.68■□□□□ 0.1
GTF2A1P52655 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.68■□□□□ 0.1
GTF2A1P52655 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.68■□□□□ 0.1
GTF2A1P52655 AL139327.4-201ENST00000612362 153 ntBASIC15.68■□□□□ 0.1
GTF2A1P52655 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GTF2A1P52655 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.68■□□□□ 0.1
GTF2A1P52655 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.68■□□□□ 0.1
GTF2A1P52655 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GTF2A1P52655 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.67■□□□□ 0.1
GTF2A1P52655 POM121L4P-202ENST00000427789 1891 ntBASIC15.67■□□□□ 0.1
GTF2A1P52655 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
GTF2A1P52655 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.67■□□□□ 0.1
GTF2A1P52655 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC15.67■□□□□ 0.1
GTF2A1P52655 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.67■□□□□ 0.1
GTF2A1P52655 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GTF2A1P52655 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GTF2A1P52655 AC233702.5-201ENST00000584107 538 ntBASIC15.67■□□□□ 0.1
GTF2A1P52655 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC15.67■□□□□ 0.1
GTF2A1P52655 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.67■□□□□ 0.1
GTF2A1P52655 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
GTF2A1P52655 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GTF2A1P52655 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.67■□□□□ 0.1
GTF2A1P52655 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GTF2A1P52655 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GTF2A1P52655 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms