Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB5CP51148 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB5CP51148 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB5CP51148 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB5CP51148 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB5CP51148 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB5CP51148 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB5CP51148 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB5CP51148 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB5CP51148 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB5CP51148 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 COL6A4P2-202ENST00000504443 2753 ntBASIC12.87□□□□□ -0.35
RAB5CP51148 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 MMP23A-201ENST00000234610 1017 ntBASIC12.87□□□□□ -0.35
RAB5CP51148 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 MIR1238-201ENST00000408483 83 ntBASIC12.87□□□□□ -0.35
RAB5CP51148 LINC00982-205ENST00000420957 435 ntBASIC12.87□□□□□ -0.35
RAB5CP51148 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 CD99P1-205ENST00000527459 561 ntBASIC12.87□□□□□ -0.35
RAB5CP51148 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB5CP51148 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB5CP51148 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
RAB5CP51148 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 AL139385.1-201ENST00000611744 3272 ntBASIC12.87□□□□□ -0.35
RAB5CP51148 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB5CP51148 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RAB5CP51148 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RAB5CP51148 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB5CP51148 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 AC136759.1-202ENST00000530858 2194 ntBASIC12.86□□□□□ -0.35
RAB5CP51148 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB5CP51148 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 AL359881.3-201ENST00000602640 1721 ntBASIC12.86□□□□□ -0.35
RAB5CP51148 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB5CP51148 DGCR9-201ENST00000609630 2415 ntBASIC12.86□□□□□ -0.35
RAB5CP51148 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.86□□□□□ -0.35
RAB5CP51148 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB5CP51148 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.86□□□□□ -0.35
RAB5CP51148 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.86□□□□□ -0.35
RAB5CP51148 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB5CP51148 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB5CP51148 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
RAB5CP51148 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB5CP51148 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB5CP51148 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.86□□□□□ -0.35
RAB5CP51148 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB5CP51148 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms