Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
MRE11P49959 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MRE11P49959 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 OR2I1P-210ENST00000642037 4691 ntBASIC18.67■□□□□ 0.58
MRE11P49959 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.67■□□□□ 0.58
MRE11P49959 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC18.67■□□□□ 0.58
MRE11P49959 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.67■□□□□ 0.58
MRE11P49959 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC18.67■□□□□ 0.58
MRE11P49959 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MRE11P49959 AC015656.1-201ENST00000624209 3578 ntBASIC18.67■□□□□ 0.58
MRE11P49959 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.67■□□□□ 0.58
MRE11P49959 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 BCRP1-201ENST00000444246 691 ntBASIC18.67■□□□□ 0.58
MRE11P49959 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
MRE11P49959 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.67■□□□□ 0.58
MRE11P49959 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.67■□□□□ 0.58
MRE11P49959 AC138761.1-201ENST00000584393 385 ntBASIC18.67■□□□□ 0.58
MRE11P49959 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.67■□□□□ 0.58
MRE11P49959 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.67■□□□□ 0.58
MRE11P49959 AC112693.3-201ENST00000624819 1983 ntBASIC18.67■□□□□ 0.58
MRE11P49959 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
MRE11P49959 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 AC132938.5-201ENST00000624980 1813 ntBASIC18.67■□□□□ 0.58
MRE11P49959 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MRE11P49959 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MRE11P49959 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MRE11P49959 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
MRE11P49959 AC090616.6-203ENST00000579186 1945 ntBASIC18.66■□□□□ 0.58
MRE11P49959 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MRE11P49959 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.66■□□□□ 0.58
MRE11P49959 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.66■□□□□ 0.58
MRE11P49959 VENTXP7-201ENST00000475503 772 ntBASIC18.66■□□□□ 0.58
MRE11P49959 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.66■□□□□ 0.58
MRE11P49959 AC190387.1-201ENST00000551683 408 ntBASIC18.66■□□□□ 0.58
MRE11P49959 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.66■□□□□ 0.58
MRE11P49959 MTDHP5-201ENST00000598980 586 ntBASIC18.66■□□□□ 0.58
MRE11P49959 AL591684.3-201ENST00000605187 298 ntBASIC18.66■□□□□ 0.58
MRE11P49959 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC18.66■□□□□ 0.58
MRE11P49959 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
MRE11P49959 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MRE11P49959 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.66■□□□□ 0.58
MRE11P49959 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MRE11P49959 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.66■□□□□ 0.58
MRE11P49959 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.65■□□□□ 0.58
MRE11P49959 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.65■□□□□ 0.58
MRE11P49959 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.65■□□□□ 0.58
MRE11P49959 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.65■□□□□ 0.58
MRE11P49959 RPS2P1-201ENST00000434010 821 ntBASIC18.65■□□□□ 0.58
MRE11P49959 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.65■□□□□ 0.58
MRE11P49959 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.65■□□□□ 0.58
MRE11P49959 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MRE11P49959 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
MRE11P49959 AC126755.1-201ENST00000525846 6405 ntBASIC18.65■□□□□ 0.58
MRE11P49959 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MRE11P49959 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.65■□□□□ 0.58
MRE11P49959 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms