Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.33■□□□□ 0.2
GRIA4P48058 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.33■□□□□ 0.2
GRIA4P48058 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIA4P48058 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIA4P48058 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIA4P48058 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GRIA4P48058 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GRIA4P48058 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
GRIA4P48058 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 MIR648-201ENST00000385046 94 ntBASIC16.32■□□□□ 0.2
GRIA4P48058 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GRIA4P48058 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.32■□□□□ 0.2
GRIA4P48058 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.32■□□□□ 0.2
GRIA4P48058 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.32■□□□□ 0.2
GRIA4P48058 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
GRIA4P48058 AC009477.1-201ENST00000452936 217 ntBASIC16.32■□□□□ 0.2
GRIA4P48058 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.32■□□□□ 0.2
GRIA4P48058 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 AL596325.1-201ENST00000563991 1082 ntBASIC16.32■□□□□ 0.2
GRIA4P48058 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.32■□□□□ 0.2
GRIA4P48058 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.32■□□□□ 0.2
GRIA4P48058 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 CETN4P-206ENST00000642099 2168 ntBASIC16.32■□□□□ 0.2
GRIA4P48058 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA4P48058 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIA4P48058 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
GRIA4P48058 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA4P48058 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA4P48058 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA4P48058 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 AC087499.5-201ENST00000452760 1342 ntBASIC16.31■□□□□ 0.2
GRIA4P48058 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GRIA4P48058 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
GRIA4P48058 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
GRIA4P48058 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 RN7SL692P-201ENST00000464677 288 ntBASIC16.31■□□□□ 0.2
GRIA4P48058 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.31■□□□□ 0.2
GRIA4P48058 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.31■□□□□ 0.2
GRIA4P48058 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA4P48058 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.31■□□□□ 0.2
GRIA4P48058 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.31■□□□□ 0.2
GRIA4P48058 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA4P48058 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA4P48058 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.31■□□□□ 0.2
GRIA4P48058 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms