Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NEDD4P46934 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
NEDD4P46934 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.67■□□□□ 0.58
NEDD4P46934 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.67■□□□□ 0.58
NEDD4P46934 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
NEDD4P46934 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NEDD4P46934 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.67■□□□□ 0.58
NEDD4P46934 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.67■□□□□ 0.58
NEDD4P46934 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
NEDD4P46934 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.67■□□□□ 0.58
NEDD4P46934 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
NEDD4P46934 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.67■□□□□ 0.58
NEDD4P46934 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.67■□□□□ 0.58
NEDD4P46934 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.67■□□□□ 0.58
NEDD4P46934 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 AC092850.2-201ENST00000623821 2697 ntBASIC18.67■□□□□ 0.58
NEDD4P46934 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 AC092384.3-202ENST00000564646 2873 ntBASIC18.67■□□□□ 0.58
NEDD4P46934 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
NEDD4P46934 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4P46934 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.66■□□□□ 0.58
NEDD4P46934 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 AL596257.1-201ENST00000641463 2694 ntBASIC18.66■□□□□ 0.58
NEDD4P46934 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.66■□□□□ 0.58
NEDD4P46934 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 FAM207CP-201ENST00000443486 507 ntBASIC18.66■□□□□ 0.58
NEDD4P46934 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.66■□□□□ 0.58
NEDD4P46934 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.66■□□□□ 0.58
NEDD4P46934 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.66■□□□□ 0.58
NEDD4P46934 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.66■□□□□ 0.58
NEDD4P46934 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEDD4P46934 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.65■□□□□ 0.58
NEDD4P46934 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NEDD4P46934 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.65■□□□□ 0.58
NEDD4P46934 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NEDD4P46934 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.65■□□□□ 0.58
NEDD4P46934 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.65■□□□□ 0.58
NEDD4P46934 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NEDD4P46934 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NEDD4P46934 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.65■□□□□ 0.58
NEDD4P46934 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.65■□□□□ 0.58
NEDD4P46934 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.65■□□□□ 0.58
NEDD4P46934 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.65■□□□□ 0.58
NEDD4P46934 AC009118.2-201ENST00000613275 655 ntBASIC18.65■□□□□ 0.58
NEDD4P46934 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEDD4P46934 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms