Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 AC013268.4-201ENST00000637413 2228 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CXCL5P42830 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC10.81□□□□□ -0.68
CXCL5P42830 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 FGFR3P6-201ENST00000457012 610 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.81□□□□□ -0.68
CXCL5P42830 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 MMP17-203ENST00000535004 719 ntTSL 3 BASIC10.81□□□□□ -0.68
CXCL5P42830 SART3-203ENST00000546611 1184 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC10.81□□□□□ -0.68
CXCL5P42830 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 MIR4515-201ENST00000584082 81 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.81□□□□□ -0.68
CXCL5P42830 AC008667.4-201ENST00000607370 168 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC10.81□□□□□ -0.68
CXCL5P42830 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.81□□□□□ -0.68
CXCL5P42830 AC107918.4-202ENST00000641623 219 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.81□□□□□ -0.68
CXCL5P42830 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.81□□□□□ -0.68
CXCL5P42830 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CXCL5P42830 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CXCL5P42830 CR383656.2-201ENST00000548656 2254 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 SSR4P1-203ENST00000599569 2260 ntBASIC10.81□□□□□ -0.68
CXCL5P42830 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC10.81□□□□□ -0.68
CXCL5P42830 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 PPT1-215ENST00000641471 2368 ntBASIC10.8□□□□□ -0.68
CXCL5P42830 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CXCL5P42830 RNU1-129P-201ENST00000384064 167 ntBASIC10.8□□□□□ -0.68
CXCL5P42830 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 MRPL20P1-201ENST00000400819 433 ntBASIC10.8□□□□□ -0.68
CXCL5P42830 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.8□□□□□ -0.68
CXCL5P42830 FOSL1P1-201ENST00000511041 816 ntBASIC10.8□□□□□ -0.68
CXCL5P42830 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
CXCL5P42830 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 U1.21-201ENST00000580816 167 ntBASIC10.8□□□□□ -0.68
CXCL5P42830 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.8□□□□□ -0.68
CXCL5P42830 AL732292.2-201ENST00000609649 430 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms